Merge pull request #392 from deepanshs/rc1.0 #2221
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: CI | |
| on: | |
| push: | |
| branches: [master] | |
| pull_request: | |
| branches: [master, 'v?.?*'] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| code_lint: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.11"] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install flake8 | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=B,C,E,F,W,T,N8 --ignore=E402 --max-line-length=88 --show-source --statistics --exclude="examples/* *.npy docs/* *.pyx *.pxd" | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=8 --max-line-length=88 --statistics --exclude="examples/* *.npy docs/* *.pyx *.pxd" | |
| testing_unix: | |
| needs: [code_lint] | |
| runs-on: "ubuntu-latest" | |
| strategy: | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12", "3.13"] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install linux system dependencies | |
| run: | | |
| sudo apt-get install --yes libopenblas-dev libfftw3-dev | |
| gcc -v | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install setuptools | |
| pip install -r requirements-dev.txt | |
| - name: Build and install package from source | |
| run: python setup.py develop | |
| - name: Test with pytest | |
| run: | | |
| python -m pip install pytest -U | |
| pytest --cov=./ --cov-report=xml | |
| - name: Upload coverage | |
| uses: codecov/[email protected] | |
| testing_mac_arm: | |
| needs: [code_lint] | |
| runs-on: "macos-latest" | |
| strategy: | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12", "3.13"] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install macos system dependencies | |
| run: brew install openblas fftw | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install setuptools | |
| pip install -r requirements-dev.txt | |
| - name: Build and install package from source | |
| run: python setup.py develop | |
| - name: Test with pytest | |
| run: | | |
| python -m pip install pytest -U | |
| pytest --cov=./ --cov-report=xml | |
| - name: Upload coverage | |
| uses: codecov/[email protected] | |
| testing_mac_intel: | |
| needs: [code_lint] | |
| runs-on: "macos-13" | |
| strategy: | |
| matrix: | |
| python-version: ["3.12", "3.13"] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install macos system dependencies | |
| run: brew install openblas fftw | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install setuptools | |
| pip install -r requirements-dev.txt | |
| - name: Build and install package from source | |
| run: python setup.py develop | |
| - name: Test with pytest | |
| run: | | |
| python -m pip install pytest -U | |
| pytest --cov=./ --cov-report=xml | |
| - name: Upload coverage | |
| uses: codecov/[email protected] | |
| testing_windows: | |
| needs: [code_lint] | |
| runs-on: "windows-latest" | |
| strategy: | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12", "3.13"] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| env: | |
| ACTIONS_ALLOW_UNSECURE_COMMANDS: "true" | |
| with: | |
| auto-update-conda: true | |
| auto-activate-base: false | |
| miniconda-version: "latest" | |
| python-version: ${{ matrix.python-version }} | |
| environment-file: environment-dev.yml | |
| activate-environment: mrsimulator-dev | |
| - run: | | |
| conda --version | |
| which python | |
| - name: Build and install package from source | |
| shell: pwsh | |
| run: | | |
| conda --version | |
| which python | |
| python setup.py develop | |
| - name: Test with pytest | |
| shell: pwsh | |
| run: | | |
| python -m pip install pytest -U | |
| pytest --cov=./ --cov-report=xml | |
| - name: Upload coverage | |
| uses: codecov/[email protected] |